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Results Found: 9
  • Mechanism of in vivo activation of the MutLgamma-Exo1 complex for meiotic crossover formation

    Authors
    Borde, Valerie
    Description

    Summary from the GEO: "Programmed DNA double-strand breaks (DSBs) initiate meiotic recombination and their subsequent repair culminates in crossover (CO) formation. COs result from the asymmetric cleavage of double-Holliday junction (dHJ) intermediates, that requires the MutLγ complex together with a non-catalytic function of Exo1, an activity essential for fertility but at risk of generating unwanted...

    Subject
    DNA Breaks, Double-Stranded
    Meiosis
    MutL Proteins
    Protein Binding
    Recombination, Genetic
    Access Rights
    Free to All
  • Mechanism of in vivo activation of the MutL-Exo1 complex for meiotic crossover formation

    Authors
    Sanchez, Aurore
    Mu, Xiaojing
    Borde, Valerie
    Keeney, Scott
    Description

    Summary from the GEO: "Programmed DNA double-strand breaks (DSBs) initiate meiotic recombination and their subsequent repair culminates in crossover (CO) formation. COs result from the asymmetric cleavage of double-Holliday junction (dHJ) intermediates, that requires the MutLγ endonuclease and a non-catalytic function of Exo1, an activity essential for fertility but at risk of generating unwanted...

    Subject
    DNA Breaks, Double-Stranded
    Meiosis
    MutL Proteins
    Protein Binding
    Recombination, Genetic
    Access Rights
    Free to All
  • Crystal Structure of a nanobody-stabilized active state of the kappa-opioid receptor

    Authors
    Che, Tao
    Majumdar, Susruta
    Zaidi, Saheem A.
    Ondachi, Pauline
    20 more author(s)...
    Description

    This deposit in the Research Collaboratory for Structural Bioinformatics Protein Data Base (PDB) includes x-ray diffraction data used for modeling the crystal structure of a nanobody-stabilized active state of the kappa-opioid receptor. The main summary display for this entry includes information on the experimental data, validation, macromolecules, small molecules, version history and funding information....

    Subject
    Protein Binding
    Receptors, Opioid, kappa
    Access Rights
    Free to All
  • 5VNG: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal II sorting motif

    Authors
    Ma, Wenfu
    Goldberg, Jonathan
    Description

    This deposit in the Research Collaboratory for Structural Bioinformatics Protein Data Base (PDB) includes x-ray diffraction  data identifying the crystal structure of Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal II sorting motif. The main summary display for this entry includes information on the experimental method, protein source, macromolecules and small molecules included...

    Subject
    Models, Chemical
    Models, Molecular
    Protein Binding
    Protein Transport
  • 5VNE: Crystal structure of Sec23a/Sec24a/Sec22 complexed with Emp24 sorting motif

    Authors
    Ma, Wenfu
    Goldberg, Jonathan
    Description

    This deposit in the Research Collaboratory for Structural Bioinformatics Protein Data Base (PDB) includes x-ray diffraction  data identifying the crystal structure of Sec23a/Sec24a/Sec22 complexed with Emp24 sorting motif. The main summary display for this entry includes information on the experimental method, protein source, macromolecules and small molecules included in the deposit, and version...

    Subject
    Models, Chemical
    Models, Molecular
    Protein Binding
    Protein Transport
    Access Rights
    Free to All
  • DPP9 activity and not protein binding inhibits the CARD8 inflammasome

    Authors
    Griswold, Andrew
    Bachovchin, Daniel
    Description

    Inflammasomes are multiprotein complexes formed in response to pathogens. NLRP1 and CARD8 are related proteins that form inflammasomes, but the pathogen-associated signal(s) and the molecular mechanisms controlling their activation have not been established. Inhibitors of the serine dipeptidyl peptidases DPP8 and DPP9 (DPP8/9) were recently discovered to activate both NLRP1 and CARD8. Interestingly,...

    Subject
    CARD Signaling Adaptor Proteins
    Dipeptidyl-Peptidases and Tripeptidyl-Peptidases
    Inflammasomes
    Mass spectrometry
    Protein Binding
    Proteomics
    Access Rights
    Free to All
  • Mutant calreticulin binders analysis

    Authors
    Kentsis, Alex
    Description

    Mutant, truncated and wild-type human calreticul was co-purified with binding proteins

    Subject
    Calreticulin
    Liquid Chromatography-Mass Spectrometry
    Mass spectrometry
    Protein Binding
    Access Rights
    Free to All
  • Mutant PP2A interactome

    Authors
    Kentsis, Alex
    Description

    Affinity enrichment of ligand to mutant and wild-type PP2A protein

    Subject
    Ligands
    Liquid Chromatography-Mass Spectrometry
    Protein Binding
    Protein Phosphatase 2
    Access Rights
    Free to All
  • Oxidized thioredoxin-1 restrains the NLRP1 inflammasome

    Authors
    Ball, Daniel
    Bachovchin, Daniel
    Description

    To find cellular protein binding partners of the NLRP1 inflammasome, FLAG-tagged full length NLRP1 (or a GFP-FLAG protein control) was ectopically expressed in HEK 293T cells and affinity purified from cell lysates (Note: the NLRP1-FLAG-containing lysate samples were affinity purified in the presence or absence of excess proline) before proteins were reduced, alkylated, and trypsinized before TMT...

    Subject
    HEK293 Cells
    Inflammasomes
    Liquid Chromatography-Mass Spectrometry
    Protein Binding
    Proteome
    Access Rights
    Free to All